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Intron Name: Anas_platyrhynchos_platyrhynchos_11_17411014_17414610_R

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

17411014 - 17414610

Intron Length:

3597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTGGGGCAAAG|C

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTTCTTTTAACT

Flanking Amino Acid:

KIQMESSPSGTIHLISPGDE

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

79.1

24.2

Major BPS

89.7

0.98

0.7

89.9

Major PPT

49.2

-0

1.2

47.4

44.2

Minor 5ss

35.8

-1.6

2.8

40.3

40.1

Minor BPS

81.3

1.06

92.89

28.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010042

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010453

17409607 - 17449668

40062