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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1742203_1742950_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1742203 - 1742950

Intron Length:

748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGCGAA

5'SS Class:

major

3'SS Sequence:

TCTTCTCTTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAACAT

U12 Branch Point Sequence:

CTTCTCTTAAAG

Flanking Amino Acid:

AYSLFSKSDVIINKTGNPEP

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

70.6

35.4

Major BPS

54.4

0.11

61.4

34.3

Major PPT

77.6

0.62

78.4

27.8

Minor 5ss

38.1

-1.3

3.4

50.9

46.1

Minor BPS

63.4

0.28

1.5

65.72

41.9

Associated Gene:

Gene:

C15orf48

Ensembl Gene ID:

ENSAPLG00000017258

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024093

1741871 - 1743755

1885