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Intron Name: Anas_platyrhynchos_platyrhynchos_11_17436103_17449337_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17436103 - 17449337

Intron Length:

13235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTAACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTTATTTTAACT

Flanking Amino Acid:

EAEGGGRAAAGCLYLVDTVV

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

62.5

42.3

Major BPS

89.7

0.98

0.7

89.9

Major PPT

78.7

0.64

0.9

72.1

37.4

Minor 5ss

-2.3

3.3

35.2

43.3

Minor BPS

80.2

1.03

1.1

92.12

30.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010042

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010453

17409607 - 17449668

40062