Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_174732_175340_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

174732 - 175340

Intron Length:

609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACAAGGC

5'SS Class:

major

3'SS Sequence:

CTTATTATACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TATTTCTTAAAT

Flanking Amino Acid:

QKDKIQHALETIHHLKNMRK

Intron Amino Acid Position:

316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

57.8

40.2

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

74.2

0.54

67.3

42.4

Minor 5ss

29.1

-2.4

3.6

41.9

44.9

Minor BPS

79.7

1.01

1.2

90.42

32.6

Associated Gene:

Gene:

DMXL2

Ensembl Gene ID:

ENSAPLG00000008330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038574

136000 - 191755

55756

ENSAPLT00000008801

136000 - 191755

55756