Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_176388_178194_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

176388 - 178194

Intron Length:

1807

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAACA

5'SS Class:

strong_major

3'SS Sequence:

CTGATTTAACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

GCTGATTTAACT

Flanking Amino Acid:

DGEYFATAGKDDCLLKVWYP

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.8

31.6

Major BPS

85.7

0.89

0.8

22.2

Major PPT

61.5

0.26

55.8

43.6

Minor 5ss

33.1

-1.9

2.9

41.4

44.7

Minor BPS

60.1

0.39

1.6

73.23

43.7

Associated Gene:

Gene:

DMXL2

Ensembl Gene ID:

ENSAPLG00000008330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038574

136000 - 191755

55756

ENSAPLT00000008801

136000 - 191755

55756