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Intron Name: Anas_platyrhynchos_platyrhynchos_11_17679664_17685548_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17679664 - 17685548

Intron Length:

5885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGCGTGG

5'SS Class:

major

3'SS Sequence:

TATTTCTGTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

GTTCATTCAATA

Flanking Amino Acid:

RHNAEVEEYERIIDALEEEK

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.3

52.2

47.1

Major BPS

0.65

1.1

77.4

37.3

Major PPT

78.5

0.64

0.9

77.9

36.1

Minor 5ss

40.3

-1.1

3.5

55.4

48.8

Minor BPS

49.7

-0

1.7

63.09

36.9

Associated Gene:

Gene:

SYNM

Ensembl Gene ID:

ENSAPLG00000008430

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008769

17678698 - 17700448

21751