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Intron Name: Anas_platyrhynchos_platyrhynchos_11_17723871_17727820_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17723871 - 17727820

Intron Length:

3950

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTACGACAA

5'SS Class:

major

3'SS Sequence:

AACTCTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTGTTTTAAAA

Flanking Amino Acid:

YMKRNSLTTLPENLAQKLPN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

60.7

39.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

80.3

0.68

0.8

77.2

36.1

Minor 5ss

30.3

-2.2

3.2

35.5

43.1

Minor BPS

66.3

0.51

1.5

75.65

35.9

Associated Gene:

Gene:

LRRC28

Ensembl Gene ID:

ENSAPLG00000008018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043851

17721118 - 17770311

49194

ENSAPLT00000008335

17721853 - 17770311

48459