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Intron Name: Anas_platyrhynchos_platyrhynchos_11_17730387_17731133_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17730387 - 17731133

Intron Length:

747

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCTCACAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTCTCTCACA

Flanking Amino Acid:

HSNNIVVVPEAIGSLVKLQF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.6

96.1

12.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

62.7

0.29

1.1

61.8

39.1

Minor 5ss

37.4

-1.4

2.8

50.6

45.9

Minor BPS

54.3

0.13

2.1

72.69

39.3

Associated Gene:

Gene:

LRRC28

Ensembl Gene ID:

ENSAPLG00000008018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043851

17721118 - 17770311

49194

ENSAPLT00000008335

17721853 - 17770311

48459