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Intron Name: Anas_platyrhynchos_platyrhynchos_11_17731272_17753649_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17731272 - 17753649

Intron Length:

22378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGGTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAATAT

U12 Branch Point Sequence:

GTTAATATAACG

Flanking Amino Acid:

ANNQLKYLPAEVGDLRELQT

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.1

1.11

0.7

89.8

22.5

Major BPS

67.5

0.44

1.1

63.7

42.3

Major PPT

81.6

0.71

0.9

77.2

37.1

Minor 5ss

-1.6

2.6

43.5

43.6

Minor BPS

48.5

-0.2

1.9

59.23

41.9

Associated Gene:

Gene:

LRRC28

Ensembl Gene ID:

ENSAPLG00000008018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043851

17721118 - 17770311

49194

ENSAPLT00000008335

17721853 - 17770311

48459