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Intron Name: Anas_platyrhynchos_platyrhynchos_11_17753857_17760151_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17753857 - 17760151

Intron Length:

6295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTAAACCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

GTTTTCTAAACC

Flanking Amino Acid:

AGNRLAFLPLDLGRSRELQY

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

68.8

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

71.6

0.49

63.9

40.9

Minor 5ss

29.6

-2.3

2.8

36.4

40.6

Minor BPS

69.9

0.6

1.6

78.59

Associated Gene:

Gene:

LRRC28

Ensembl Gene ID:

ENSAPLG00000008018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043851

17721118 - 17770311

49194

ENSAPLT00000008335

17721853 - 17770311

48459