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Intron Name: Anas_platyrhynchos_platyrhynchos_11_17766698_17770058_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17766698 - 17770058

Intron Length:

3361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAATTATA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTTTCT

Flanking Amino Acid:

RETPMAGLHQGRTTVSFVAY

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

79.9

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

0.99

0.5

88.9

28.2

Minor 5ss

38.9

-1.2

2.8

43.2

43.9

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

LRRC28

Ensembl Gene ID:

ENSAPLG00000008018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043851

17721118 - 17770311

49194

ENSAPLT00000008335

17721853 - 17770311

48459