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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1780888_1781492_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1780888 - 1781492

Intron Length:

605

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TATGTTTTTAAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

ACTGCCTTAACT

Flanking Amino Acid:

CNYILDVDALFSEAKHYHSK

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

86.2

29.2

Major BPS

0.47

1.2

61.1

45.5

Major PPT

74.4

0.55

1.1

74.8

38.8

Minor 5ss

38.5

-1.3

2.8

49.8

40.3

Minor BPS

78.6

0.98

1.3

86.17

Associated Gene:

Gene:

BLOC1S6

Ensembl Gene ID:

ENSAPLG00000004081

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004183

1778138 - 1782714

4577