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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1787842_1790920_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1787842 - 1790920

Intron Length:

3079

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

CCATATCTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CTGTCATTAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.9

79.3

32.9

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

75.8

0.58

0.9

69.1

36.4

Minor 5ss

17.2

-3.8

3.5

23.1

37.4

Minor BPS

72.9

0.8

1.6

85.11

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003837

1787478 - 1798130

10653