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Intron Name: Anas_platyrhynchos_platyrhynchos_11_17892278_17893847_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17892278 - 17893847

Intron Length:

1570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGAGTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAG

U12 Branch Point Sequence:

TTTTAGTAACTC

Flanking Amino Acid:

PSSKGMMPPLSEEDELELNT

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

26.1

Major BPS

72.5

0.56

1.5

71.7

44.6

Major PPT

68.1

0.41

1.1

61.6

43.4

Minor 5ss

39.7

-1.2

2.8

45.9

43.7

Minor BPS

42.4

-0.6

2.5

62.54

43.6

Associated Gene:

Gene:

MEF2A

Ensembl Gene ID:

ENSAPLG00000007352

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035454

17856304 - 17904295

47992

ENSAPLT00000020089

17823545 - 17904295

80751

ENSAPLT00000017947

17856304 - 17904295

47992

ENSAPLT00000040905

17816713 - 17904295

87583