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Intron Name: Anas_platyrhynchos_platyrhynchos_11_17892278_17897428_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17892278 - 17897428

Intron Length:

5151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TAATCATTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTATTTTTAATC

Flanking Amino Acid:

PSSKGMMPPLNTQRISSSQS

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

26.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.8

0.54

0.9

39.4

Minor 5ss

39.7

-1.2

2.8

45.9

43.7

Minor BPS

75.9

0.79

78.34

30.9

Associated Gene:

Gene:

MEF2A

Ensembl Gene ID:

ENSAPLG00000007352

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027523

17856159 - 17904295

48137

ENSAPLT00000007674

17856159 - 17904295

48137