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Intron Name: Anas_platyrhynchos_platyrhynchos_11_17902677_17903179_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17902677 - 17903179

Intron Length:

503

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TTCTTTTTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

GTTTTCTTATTT

Flanking Amino Acid:

HLGPATLSSLVTGSQLSQGS

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

76.2

34.7

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

89.6

0.89

0.6

83.8

31.2

Minor 5ss

-1.5

2.8

43.1

43.9

Minor BPS

69.9

0.7

1.5

84.13

Associated Gene:

Gene:

MEF2A

Ensembl Gene ID:

ENSAPLG00000007352

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020089

17823545 - 17904295

80751

ENSAPLT00000017947

17856304 - 17904295

47992

ENSAPLT00000040905

17816713 - 17904295

87583

ENSAPLT00000007674

17856159 - 17904295

48137

ENSAPLT00000035454

17856304 - 17904295

47992

ENSAPLT00000027523

17856159 - 17904295

48137