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Intron Name: Anas_platyrhynchos_platyrhynchos_11_179445_180087_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
179445 - 180087

Intron Length:
643

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAATGTGG

5'SS Class:
major

3'SS Sequence:
TGTTCATTTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGTTCAT

U12 Branch Point Sequence:
TGTTGTTCATTT

Flanking Amino Acid:
MTYNLAWDPQGNRLLTATNC

Intron Amino Acid Position:
122

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.5
0.65
1
63.2
43.6

Major BPS
84.8
0.86
1
85.7
34.9

Major PPT
84.6
0.78
0.8
81.6
35

Minor 5ss
36.2
-1.6
3.2
47.4
48

Minor BPS
46.3
-0.2
2.1
68.46
43.1

Associated Gene:

Gene:
DMXL2

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

136000 - 191755
55756

136006 - 191755
55750

136000 - 191755
55756