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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1794503_1794992_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1794503 - 1794992

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCTGTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

ATAAACTAGACA

Flanking Amino Acid:

DKPGVTEVHQYEMLHVTPPM

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

35.2

Major BPS

0.72

38.9

Major PPT

72.7

0.51

0.9

65.6

Minor 5ss

28.4

-2.5

2.8

34.6

41.3

Minor BPS

47.3

-0.2

1.9

59.4

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003837

1787478 - 1798130

10653