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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18001456_18004906_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
18001456 - 18004906

Intron Length:
3451

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCC|GTAAGTCTT

5'SS Class:
major

3'SS Sequence:
TTTTGTGTGATAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTGAC

U12 Branch Point Sequence:
TTCTGCTGACCT

Flanking Amino Acid:
RFRQRKCDNPPPGPGGKNCR

Intron Amino Acid Position:
548

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.2
0.5
1.3
73.1
43.9

Major BPS
66.3
0.4
1.1
57
41.8

Major PPT
71.7
0.49
1.1
68.8
42.1

Minor 5ss
42
-0.9
3.1
63.9
40.4

Minor BPS
50.7
0.1
2.2
76.42
46.1

Associated Gene:

Gene:
ADAMTS17

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

17936222 - 18103291
167070

17936222 - 18103291
167070