Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_18020382_18037575_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18020382 - 18037575

Intron Length:

17194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGACCT

5'SS Class:

strong_major

3'SS Sequence:

TTTAACTAAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTTGTTTTAACT

Flanking Amino Acid:

AFTIAHELGHNMGMSHDDDH

Intron Amino Acid Position:

368

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

71.9

Major BPS

89.7

0.98

0.7

89.9

Major PPT

68.1

0.41

1.1

63.2

41.7

Minor 5ss

36.3

-1.6

3.2

50.3

39.7

Minor BPS

78.3

0.97

1.2

90.89

33.1

Associated Gene:

Gene:

ADAMTS17

Ensembl Gene ID:

ENSAPLG00000006978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035065

17936222 - 18103291

167070

ENSAPLT00000007253

17936222 - 18103291

167070