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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18171412_18172605_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18171412 - 18172605

Intron Length:

1194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTTAGTACA

5'SS Class:

strong_major

3'SS Sequence:

ACCTACTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTATATTGAATT

Flanking Amino Acid:

ALLLSYLKFDRLRRDAADNL

Intron Amino Acid Position:

470

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

1.1

81.8

31.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

77.1

0.61

0.9

73.1

36.3

Minor 5ss

32.4

-2

2.4

35.7

40.3

Minor BPS

61.1

0.43

1.6

78.83

37.2

Associated Gene:

Gene:

LINS1

Ensembl Gene ID:

ENSAPLG00000006710

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006965

18170321 - 18180540

10220

ENSAPLT00000041193

18170321 - 18181267

10947

ENSAPLT00000018985

18170321 - 18181267

10947