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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18190773_18197474_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
18190773 - 18197474

Intron Length:
6702

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGAGTTGC

5'SS Class:
strong_major

3'SS Sequence:
ATTTTAACTTCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTATTTTAACT

Flanking Amino Acid:
RCVRVFLEHGADPTVKDLIG

Intron Amino Acid Position:
71

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
90.7
0.96
0.8
78.3
32.5

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
79.6
0.67
0.9
76.1
37.4

Minor 5ss
35.1
-1.7
2.8
43.9
43.9

Minor BPS
80.2
1.03
1.1
92.12
30.1

Associated Gene:

Gene:
ASB7

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

18184618 - 18208951
24334

18181668 - 18208951
27284