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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1825396_1830364_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1825396 - 1830364

Intron Length:

4969

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGATGGAA

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTCAG

U12 Branch Point Sequence:

GCTGCCTCAGCC

Flanking Amino Acid:

SDGLLYQCQKVSRTGSEEPS

Intron Amino Acid Position:

1140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

67.2

33.2

Major BPS

46.3

-0.2

1.6

53.3

44.2

Major PPT

95.8

1.03

0.5

92.1

18.3

Minor 5ss

23.2

-3.1

3.2

28.6

43.7

Minor BPS

48.6

-0.1

1.9

59.35

45.4

Associated Gene:

Gene:

AP4E1

Ensembl Gene ID:

ENSAPLG00000003399

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032903

1824566 - 1851687

27122