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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18285961_18291342_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18285961 - 18291342

Intron Length:

5382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GTGGCTGCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

GTAACCTCACTT

Flanking Amino Acid:

KICDIEEGDKPDVDNAVEAA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

85.2

32.2

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

0.36

58.1

43.1

Minor 5ss

37.2

-1.4

3.6

57.3

47.4

Minor BPS

48.9

-0

1.9

66.96

43.5

Associated Gene:

Gene:

ALDH1A3

Ensembl Gene ID:

ENSAPLG00000006274

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006544

18282297 - 18316466

34170