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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18294195_18295424_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18294195 - 18295424

Intron Length:

1230

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAC

U12 Branch Point Sequence:

TTTTTTTCCCCT

Flanking Amino Acid:

DKIQGRTIPVDENFVCFTRH

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

75.8

Major BPS

71.3

0.53

1.1

63.1

44.5

Major PPT

88.6

0.87

0.7

83.9

31.1

Minor 5ss

-1

2.7

45.9

42.3

Minor BPS

39.8

-0.6

3.6

74.97

42.5

Associated Gene:

Gene:

ALDH1A3

Ensembl Gene ID:

ENSAPLG00000006274

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006544

18282297 - 18316466

34170