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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1829706_1830364_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1829706 - 1830364

Intron Length:

659

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGATGGAA

5'SS Class:

major

3'SS Sequence:

TTCCTGTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

TGGATATGATCT

Flanking Amino Acid:

SDGLLYQCQKFFLHHVSVTL

Intron Amino Acid Position:

1140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

67.2

33.2

Major BPS

75.8

0.64

65.8

Major PPT

0.79

0.8

79.8

32.1

Minor 5ss

23.2

-3.1

3.2

28.6

43.7

Minor BPS

43.1

-0.4

1.9

59.47

43.3

Associated Gene:

Gene:

AP4E1

Ensembl Gene ID:

ENSAPLG00000003399

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003490

1829640 - 1851687

22048