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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18312490_18313654_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18312490 - 18313654

Intron Length:

1165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTATCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGGTATTGAATT

Flanking Amino Acid:

LASALQSGTVWINCYNALYA

Intron Amino Acid Position:

465

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

74.5

41.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.1

0.63

0.8

73.6

35.7

Minor 5ss

41.2

-1

2.9

54.6

44.5

Minor BPS

54.3

0.21

1.6

70.51

40.6

Associated Gene:

Gene:

ALDH1A3

Ensembl Gene ID:

ENSAPLG00000006274

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006544

18282297 - 18316466

34170