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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1832011_1833419_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1832011 - 1833419

Intron Length:

1409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTGAAAATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TCCTTTTGAAAA

Flanking Amino Acid:

LVFEKAEHFQILESPAHQFS

Intron Amino Acid Position:

978

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

84.2

26.4

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

67.8

0.4

1.1

60.6

43.8

Minor 5ss

33.8

-1.8

2.9

42.8

44.4

Minor BPS

0.06

1.5

60.4

Associated Gene:

Gene:

AP4E1

Ensembl Gene ID:

ENSAPLG00000003399

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046522

1830347 - 1851214

20868

ENSAPLT00000032903

1824566 - 1851687

27122

ENSAPLT00000003490

1829640 - 1851687

22048