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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1833996_1834698_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1833996 - 1834698

Intron Length:

703

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTCCAT

U12 Branch Point Sequence:

GCTCTCTCCATC

Flanking Amino Acid:

GLGSNAGVSLMGKMDVATQK

Intron Amino Acid Position:

786

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.5

Major BPS

64.7

0.37

1.3

74.7

Major PPT

96.8

1.05

0.5

96.1

13.2

Minor 5ss

34.5

-1.8

3.3

45.9

43.7

Minor BPS

44.5

-0.4

1.9

52.08

39.6

Associated Gene:

Gene:

AP4E1

Ensembl Gene ID:

ENSAPLG00000003399

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003490

1829640 - 1851687

22048

ENSAPLT00000046522

1830347 - 1851214

20868

ENSAPLT00000032903

1824566 - 1851687

27122