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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18340445_18342858_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18340445 - 18342858

Intron Length:

2414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCACCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTTAT

U12 Branch Point Sequence:

TTTTCTTCACCA

Flanking Amino Acid:

CEETALQVEKCQLLGIAAAY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

77.8

33.3

Major BPS

72.5

0.56

1.1

63.4

Major PPT

83.9

0.76

0.8

78.6

34.6

Minor 5ss

40.1

-1.1

3.4

55.5

48.7

Minor BPS

63.9

0.43

1.8

79.34

37.2

Associated Gene:

Gene:

LRRK1

Ensembl Gene ID:

ENSAPLG00000005994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044448

18323957 - 18393172

69216

ENSAPLT00000035106

18323957 - 18396850

72894

ENSAPLT00000006260

18323957 - 18395580

71624