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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18343031_18344415_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18343031 - 18344415

Intron Length:

1385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCCTA

5'SS Class:

strong_major

3'SS Sequence:

ATCTTTCCGGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAA

U12 Branch Point Sequence:

GTGGCATCAACT

Flanking Amino Acid:

VVKELLDSLHDPRTCQQLLN

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

70.7

41.3

Major BPS

0.55

1.1

63.4

44.3

Major PPT

69.3

0.43

0.9

66.7

Minor 5ss

41.6

-0.9

3.1

53.4

44.8

Minor BPS

0.08

70.42

45.8

Associated Gene:

Gene:

LRRK1

Ensembl Gene ID:

ENSAPLG00000005994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044448

18323957 - 18393172

69216

ENSAPLT00000035106

18323957 - 18396850

72894

ENSAPLT00000006260

18323957 - 18395580

71624