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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18345405_18352448_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18345405 - 18352448

Intron Length:

7044

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

CTGAAATATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

CTTCTCTGAAAT

Flanking Amino Acid:

PLPGSAPTKTALCVNWSNLK

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

70.3

40.5

Major BPS

69.8

0.49

37.5

Major PPT

62.9

0.29

1.1

55.2

43.6

Minor 5ss

38.3

-1.3

2.8

51.5

Minor BPS

58.5

0.35

1.6

75.47

40.7

Associated Gene:

Gene:

LRRK1

Ensembl Gene ID:

ENSAPLG00000005994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006260

18323957 - 18395580

71624

ENSAPLT00000044448

18323957 - 18393172

69216

ENSAPLT00000035106

18323957 - 18396850

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