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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18370966_18371192_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18370966 - 18371192

Intron Length:

227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAGGTCAC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TATTACTGATTT

Flanking Amino Acid:

DIKDYEDLQTAINFLIETGT

Intron Amino Acid Position:

864

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

63.6

42.9

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

93.7

0.98

0.6

88.2

29.1

Minor 5ss

33.6

-1.9

3.2

44.4

43.5

Minor BPS

52.8

0.17

1.9

75.45

Associated Gene:

Gene:

LRRK1

Ensembl Gene ID:

ENSAPLG00000005994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044448

18323957 - 18393172

69216

ENSAPLT00000035106

18323957 - 18396850

72894

ENSAPLT00000006260

18323957 - 18395580

71624