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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18371470_18374509_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18371470 - 18374509

Intron Length:

3040

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TGATTTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TTGAATTTGATT

Flanking Amino Acid:

FEIALPVANNRYLLPHLLPT

Intron Amino Acid Position:

956

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

69.7

43.7

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

79.7

0.67

77.1

41.8

Minor 5ss

38.2

-1.3

3.1

49.2

47.1

Minor BPS

55.1

0.24

1.5

72.21

39.2

Associated Gene:

Gene:

LRRK1

Ensembl Gene ID:

ENSAPLG00000005994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044448

18323957 - 18393172

69216

ENSAPLT00000035106

18323957 - 18396850

72894

ENSAPLT00000006260

18323957 - 18395580

71624