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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18377683_18379087_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18377683 - 18379087

Intron Length:

1405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

GCTTGGTTTGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

TTGTGAATCACT

Flanking Amino Acid:

VNSLIDQWFPALTATESDGT

Intron Amino Acid Position:

1115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.1

31.1

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

64.5

0.33

1.2

63.2

42.1

Minor 5ss

29.9

-2.3

3.3

42.5

Minor BPS

42.8

-0.4

2.5

69.87

46.6

Associated Gene:

Gene:

LRRK1

Ensembl Gene ID:

ENSAPLG00000005994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044448

18323957 - 18393172

69216

ENSAPLT00000035106

18323957 - 18396850

72894

ENSAPLT00000006260

18323957 - 18395580

71624