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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18379338_18380784_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18379338 - 18380784

Intron Length:

1447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTTA

5'SS Class:

strong_major

3'SS Sequence:

ATCTCTTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTCTTTTAATT

Flanking Amino Acid:

PELFMTDFPARLFLENSKLE

Intron Amino Acid Position:

1198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

77.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.9

0.58

72.9

36.7

Minor 5ss

40.4

-1.1

3.3

55.8

48.3

Minor BPS

77.3

0.94

88.63

29.6

Associated Gene:

Gene:

LRRK1

Ensembl Gene ID:

ENSAPLG00000005994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044448

18323957 - 18393172

69216

ENSAPLT00000035106

18323957 - 18396850

72894

ENSAPLT00000006260

18323957 - 18395580

71624