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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18380952_18381865_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18380952 - 18381865

Intron Length:

914

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACAGTAC

5'SS Class:

major

3'SS Sequence:

TTTGTCTTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAG

U12 Branch Point Sequence:

CTTAGCTGGAGA

Flanking Amino Acid:

KCNGSPTSAVDTMLKHLRAM

Intron Amino Acid Position:

1254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

63.5

37.6

Major BPS

67.5

0.43

1.5

65.7

43.2

Major PPT

0.65

73.4

41.9

Minor 5ss

35.3

-1.7

3.5

49.3

47.2

Minor BPS

42.9

-0.5

2.2

55.55

43.5

Associated Gene:

Gene:

LRRK1

Ensembl Gene ID:

ENSAPLG00000005994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044448

18323957 - 18393172

69216

ENSAPLT00000035106

18323957 - 18396850

72894

ENSAPLT00000006260

18323957 - 18395580

71624