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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18382064_18382723_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18382064 - 18382723

Intron Length:

660

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGCG

5'SS Class:

major

3'SS Sequence:

TCCTTTGTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAA

U12 Branch Point Sequence:

ATTACAAGAACT

Flanking Amino Acid:

LTTVLSENSKGSSFVPLGHM

Intron Amino Acid Position:

1320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

65.8

38.4

Major BPS

64.7

0.37

31.5

Major PPT

74.3

0.55

71.1

38.6

Minor 5ss

30.1

-2.3

3.3

39.2

46.2

Minor BPS

48.7

-0

75.24

40.2

Associated Gene:

Gene:

LRRK1

Ensembl Gene ID:

ENSAPLG00000005994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044448

18323957 - 18393172

69216

ENSAPLT00000035106

18323957 - 18396850

72894

ENSAPLT00000006260

18323957 - 18395580

71624