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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18383002_18383121_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18383002 - 18383121

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATATG

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGCCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAG

U12 Branch Point Sequence:

TTGCCCTTTTCT

Flanking Amino Acid:

IRPRIVYDEKVDMFSYGMVL

Intron Amino Acid Position:

1413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

84.2

33.9

Major BPS

48.9

-0

1.5

46.7

38.9

Major PPT

71.4

0.48

0.9

62.8

39.7

Minor 5ss

38.7

-1.3

2.9

50.6

45.9

Minor BPS

44.6

-0.3

3.6

77.68

44.5

Associated Gene:

Gene:

LRRK1

Ensembl Gene ID:

ENSAPLG00000005994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006260

18323957 - 18395580

71624

ENSAPLT00000044448

18323957 - 18393172

69216

ENSAPLT00000035106

18323957 - 18396850

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