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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18384292_18385873_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18384292 - 18385873

Intron Length:

1582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGGTGG

5'SS Class:

major

3'SS Sequence:

TTTCTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAT

U12 Branch Point Sequence:

TAGCAAATGATT

Flanking Amino Acid:

VVFWDGKEDTRNYTVVNPEK

Intron Amino Acid Position:

1528

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.2

62.5

44.4

Major BPS

0.45

57.8

Major PPT

93.6

0.98

0.6

92.4

17.8

Minor 5ss

32.5

-2

3.1

46.2

Minor BPS

41.2

-0.6

1.9

56.87

39.1

Associated Gene:

Gene:

LRRK1

Ensembl Gene ID:

ENSAPLG00000005994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044448

18323957 - 18393172

69216

ENSAPLT00000035106

18323957 - 18396850

72894

ENSAPLT00000006260

18323957 - 18395580

71624