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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1838480_1839550_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1838480 - 1839550

Intron Length:

1071

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGTAG

5'SS Class:

major

3'SS Sequence:

TCATTGTGCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TCTCTGTTCATT

Flanking Amino Acid:

PQKFLQVMSWVLGEYSSLAT

Intron Amino Acid Position:

516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

66.6

41.6

Major BPS

84.8

0.86

85.7

34.9

Major PPT

65.1

0.34

60.6

40.2

Minor 5ss

35.6

-1.6

3.2

38.1

46.8

Minor BPS

45.8

-0.2

2.4

68.07

43.7

Associated Gene:

Gene:

AP4E1

Ensembl Gene ID:

ENSAPLG00000003399

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003490

1829640 - 1851687

22048

ENSAPLT00000046522

1830347 - 1851214

20868

ENSAPLT00000032903

1824566 - 1851687

27122