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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18387415_18392462_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18387415 - 18392462

Intron Length:

5048

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAGAA

U12 Branch Point Sequence:

GAACCCAGAAAG

Flanking Amino Acid:

CFLVMPVVKKNSYVVLAGLS

Intron Amino Acid Position:

1607

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

50.4

0.01

1.1

47.3

36.1

Major PPT

88.6

0.87

0.7

24.1

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

42.9

-0.6

1.8

44.19

39.8

Associated Gene:

Gene:

LRRK1

Ensembl Gene ID:

ENSAPLG00000005994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044448

18323957 - 18393172

69216

ENSAPLT00000035106

18323957 - 18396850

72894

ENSAPLT00000006260

18323957 - 18395580

71624