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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18393991_18395402_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18393991 - 18395402

Intron Length:

1412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGGCCG

5'SS Class:

major

3'SS Sequence:

CTTGGTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAT

U12 Branch Point Sequence:

CCGCGCTGATGC

Flanking Amino Acid:

VLKAGELAPYGTLVDAALIA

Intron Amino Acid Position:

1919

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

44.7

Major BPS

63.8

0.34

1.2

54.7

43.1

Major PPT

74.1

0.54

0.9

65.2

41.2

Minor 5ss

25.2

-2.9

22.7

36.8

Minor BPS

35.1

-1.1

35.72

41.1

Associated Gene:

Gene:

LRRK1

Ensembl Gene ID:

ENSAPLG00000005994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035106

18323957 - 18396850

72894

ENSAPLT00000006260

18323957 - 18395580

71624