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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1839670_1839805_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1839670 - 1839805

Intron Length:

136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAA

U12 Branch Point Sequence:

TGTGTTTCAAGC

Flanking Amino Acid:

PNNFLRLLAEGFDDRKEDEQ

Intron Amino Acid Position:

476

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

1.1

72.3

39.5

Major BPS

0.57

1.2

77.7

37.1

Major PPT

85.1

0.79

0.7

78.2

30.6

Minor 5ss

40.1

-1.1

2.9

52.9

44.3

Minor BPS

46.9

-0.2

1.9

58.24

41.2

Associated Gene:

Gene:

AP4E1

Ensembl Gene ID:

ENSAPLG00000003399

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046522

1830347 - 1851214

20868

ENSAPLT00000032903

1824566 - 1851687

27122

ENSAPLT00000003490

1829640 - 1851687

22048