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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1839919_1841013_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

1839919 - 1841013

Intron Length:

1095

Sequence Information:

Terminal Dinucleotides:

AT-AG

5'SS Sequence:

GAA|ATATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

AACATCTGGACAG|G

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

CATTCCTTAACA

Flanking Amino Acid:

LSGKVAELAEKYAPDNGWFI

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

34.5

-0.9

3.4

43.9

Major BPS

0.52

1.1

77.7

35.3

Major PPT

55.2

0.12

1.1

49.8

Minor 5ss

99.7

1.65

0.6

98.9

3.35

Minor BPS

85.3

1.1

84.73

Associated Gene:

Gene:

AP4E1

Ensembl Gene ID:

ENSAPLG00000003399

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046522

1830347 - 1851214

20868

ENSAPLT00000032903

1824566 - 1851687

27122

ENSAPLT00000003490

1829640 - 1851687

22048