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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18478014_18478299_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18478014 - 18478299

Intron Length:

286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGCGGGGA

5'SS Class:

major

3'SS Sequence:

CTCTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

CACCCTCTAATT

Flanking Amino Acid:

AVRDRELDLRGYKIPVIENL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.2

0.36

1.1

51.6

41.4

Major BPS

82.2

0.8

0.9

81.6

Major PPT

82.9

0.74

0.7

76.2

32.4

Minor 5ss

22.6

-3.2

3.4

28.2

43.9

Minor BPS

49.4

0.03

1.7

62.86

41.7

Associated Gene:

Gene:

SNRPA1

Ensembl Gene ID:

ENSAPLG00000005771

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005973

18472994 - 18478381

5388