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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18484214_18484599_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18484214 - 18484599

Intron Length:

386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCGCCTCGCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TGTTCCTCGCCT

Flanking Amino Acid:

SCVTNETCTNADKTFCEMVK

Intron Amino Acid Position:

789

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

67.3

36.7

Major BPS

84.4

0.85

34.5

Major PPT

65.1

0.34

57.6

38.6

Minor 5ss

32.2

-2

3.4

43.3

Minor BPS

45.7

-0.2

3.6

80.55

41.3

Associated Gene:

Gene:

PCSK6

Ensembl Gene ID:

ENSAPLG00000005333

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005545

18483116 - 18503031

19916