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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18486695_18487065_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18486695 - 18487065

Intron Length:

371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGGGAG

5'SS Class:

major

3'SS Sequence:

TTAATTTGGAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

LCPPGFYAEERQKRCLKCHQ

Intron Amino Acid Position:

648

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.3

63.9

42.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

56.1

0.14

1.3

59.4

45.1

Minor 5ss

29.9

-2.3

3.5

36.6

41.4

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

PCSK6

Ensembl Gene ID:

ENSAPLG00000005333

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005545

18483116 - 18503031

19916