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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18489872_18490613_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18489872 - 18490613

Intron Length:

742

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGGC

5'SS Class:

major

3'SS Sequence:

CTGCCCCCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

GGTTTATTAATT

Flanking Amino Acid:

VCVGSLDRVPKYIRPDHVLR

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

0.9

69.4

35.6

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

63.3

0.3

58.2

33.1

Minor 5ss

29.3

-2.4

3.1

34.7

35.3

Minor BPS

65.1

0.55

1.6

78.53

37.4

Associated Gene:

Gene:

PCSK6

Ensembl Gene ID:

ENSAPLG00000005333

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005545

18483116 - 18503031

19916