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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18491046_18491722_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18491046 - 18491722

Intron Length:

677

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCGTGAC

U12 Branch Point Sequence:

CGTGCCGTGACC

Flanking Amino Acid:

AGIIALALEANPLLTWRDVQ

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

88.1

25.2

Major BPS

48.6

-0

1.2

40.4

Major PPT

83.4

0.75

0.8

77.3

31.4

Minor 5ss

40.3

-1.1

3.4

58.5

40.4

Minor BPS

48.9

-0.1

2.2

62.08

43.9

Associated Gene:

Gene:

PCSK6

Ensembl Gene ID:

ENSAPLG00000005333

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005545

18483116 - 18503031

19916